HCA Data Explorer

Neuronal defects in a human cellular model of 22q11.2 deletion syndrome.

Updated October 17, 2023

22q11.2 deletion syndrome (22q11DS) is a highly penetrant and common genetic cause of neuropsychiatric disease. Here we generated induced pluripotent stem cells from 15 individuals with 22q11DS and 15 control individuals and differentiated them into three-dimensional (3D) cerebral cortical organoids. Transcriptional profiling across 100 days showed high reliability of differentiation and revealed changes in neuronal excitability-related genes. Using electrophysiology and live imaging, we identified defects in spontaneous neuronal activity and calcium signaling in both organoid- and 2D-derived cortical neurons. The calcium deficit was related to resting membrane potential changes that led to abnormal inactivation of voltage-gated calcium channels. Heterozygous loss of DGCR8 recapitulated the excitability and calcium phenotypes and its overexpression rescued these defects. Moreover, the 22q11DS calcium abnormality could also be restored by application of antipsychotics. Taken together, our study illustrates how stem cell derived models can be used to uncover and rescue cellular phenotypes associated with genetic forms of neuropsychiatric disease.

Sergiu P PaşcaDepartment of Psychiatry and Behavioral Sciences, Stanford University, Stanford, CA, USA. spasca@stanford.edu
Themasap A Khan1
Omer Revah1
Aaron Gordon2
Se-Jin Yoon1
Anna K Krawisz3
Carleton Goold3
Yishan Sun3
Chul Hoon Kim3
Yuan Tian2
Min-Yin Li1
Julia M Schaepe1
Kazuya Ikeda4
Neal D Amin1
Noriaki Sakai1
Masayuki Yazawa3
Leila Kushan5
Seiji Nishino1
Matthew H Porteus4
Judith L Rapoport6
Jonathan A Bernstein4
Ruth O'Hara1
Carrie E Bearden5
Joachim F Hallmayer1
John R Huguenard7
Daniel H Geschwind2
Ricardo E Dolmetsch8
Sergiu P Paşca9
1Department of Psychiatry and Behavioral Sciences, Stanford University, Stanford, CA, USA.
2Program in Neurogenetics, Department of Neurology, University of California Los Angeles, Los Angeles, CA, USA.
3Department of Neurobiology, Stanford University, Stanford, CA, USA.
4Department of Pediatrics, Stanford University, Stanford, CA, USA.
5Department of Psychiatry and Biobehavioral Sciences, University of California Los Angeles, Los Angeles, CA, USA.
6National Institute of Mental Health, Child Psychiatry Branch, Bethesda, MD, USA.
7Department of Neurology and Neurological Sciences, Stanford University, Stanford, CA, USA.
8Novartis Institutes for BioMedical Research, Cambridge, MA, USA.
9Department of Psychiatry and Behavioral Sciences, Stanford University, Stanford, CA, USA.
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To reference this project, please use the following link:

https://explore.data.humancellatlas.dev.clevercanary.com/projects/645b20c9-5ed0-4500-86b5-7aef770d010a
None
INSDC Project Accessions:GEO Series Accessions:INSDC Study Accessions:

Atlas

None

Analysis Portals

None

Project Label

cerebralCortexOrganoids22q11DS

Species

Homo sapiens

Sample Type

organoids

Anatomical Entity

skin of body

Organ Part

Unspecified

Selected Cell Types

Unspecified

Model Organ

brain

Disease Status (Specimen)

4 disease statuses

Disease Status (Donor)

4 disease statuses

Development Stage

human adult stage

Library Construction Method

10x 3' v2

Nucleic Acid Source

single cell

Paired End

false

Analysis Protocol

analysis_protocol_1

File Format

2 file formats

Cell Count Estimate

Unspecified

Donor Count

4
tar1 file(s)xlsx1 file(s)