Assessing Cellular and Transcriptional diversity of IIeal Mucosa amongst Treatment Naïve and Treated Crohn’s disease
Updated August 23, 2024Crohn’s disease (CD) is a chronic inflammatory disease of the gastrointestinal tract. We used single cell RNA sequencing (scRNAseq) to define the cellular and transcriptional activity of the mucosa at different stages of disease progression in CD. Overall design: Terminal ileal mucosal derived single cells was processed and analyzed using scRNAseq
To reference this project, please use the following link:
Downloaded and exported data is governed by the HCA Data Release Policy and licensed under the Creative Commons Attribution 4.0 International License (CC BY 4.0). For more information please see our Data Use Agreement.
Atlas
Analysis Portals
NoneProject Label
diversityOfIlealMucosaSpecies
Homo sapiens
Sample Type
specimens
Anatomical Entity
ileum
Organ Part
ileal mucosa
Selected Cell Types
Unspecified
Disease Status (Specimen)
Disease Status (Donor)
Development Stage
Library Construction Method
10x 5' v1
Nucleic Acid Source
single cell
Paired End
trueAnalysis Protocol
analysis_protocol_1File Format
Cell Count Estimate
139.9kDonor Count
27