HCA Data Explorer

Construction of a single-cell transcriptomic atlas of 58,243 liver cells from 4 donors and 4 recipient liver transplasnt patients to investigate early allograft dysfunction (EAD).

Updated September 15, 2022

Liver transplantation (LT) is the standard therapy for the patients with end-stage liver disease. The authors constructed a single-cell transcriptomic atlas of 58,243 liver cells from 4 donors and 4 recipient liver transplant patients.

Xiao XuZhejiang University School of Medicinezjxu@zju.edu.cn
Xiaohui FanZhejiang Universityfanxh@zju.edu.cn
Xin Shao1
Kai Wang2
Zheng Wang1
Xiao Xu2
Xiaohui Fan1
Xiaoyan Lu1
Li Zhuang3
Xinyu Yang2
Ping Zhang1
Penghui Yang1
Shusen Zheng1
1Zhejiang University
2Zhejiang University School of Medicine
3Shulan (Hangzhou) Hospital
Ami Day

To reference this project, please use the following link:

https://explore.data.humancellatlas.dev.clevercanary.com/projects/c7c54245-548b-4d4f-b15e-0d7e238ae6c8
None
INSDC Project Accessions:GEO Series Accessions:INSDC Study Accessions:

Atlas

None

Analysis Portals

None

Project Label

LiverAllograftDysfunction

Species

Homo sapiens

Sample Type

specimens

Anatomical Entity

liver

Organ Part

Unspecified

Selected Cell Types

Unspecified

Disease Status (Specimen)

2 disease statuses

Disease Status (Donor)

2 disease statuses

Development Stage

human adult stage

Library Construction Method

10x 3' v3

Nucleic Acid Source

single cell

Paired End

false

Analysis Protocol

analysis_protocol_cell_type_assignment, analysis_protocol_processed, analysis_protocol_raw

File Format

4 file formats

Cell Count Estimate

58.2k

Donor Count

8
csv.gz2 file(s)fastq.gz64 file(s)txt1 file(s)xlsx1 file(s)