HCA Data Explorer

Kidney micro-organoids in suspension culture as a scalable source of human pluripotent stem cell-derived kidney cells.

Updated November 29, 2022

Kidney organoids have potential uses in disease modelling, drug screening and regenerative medicine. However, novel cost-effective techniques are needed to enable scaled-up production of kidney cell types in vitro. The authors describe here a modified suspension culture method for the generation of kidney micro-organoids from human pluripotent stem cells. Optimisation of differentiation conditions allowed the formation of micro-organoids, each containing six to ten nephrons that were surrounded by endothelial and stromal populations. Single cell transcriptional profiling confirmed the presence and transcriptional equivalence of all anticipated renal cell types consistent with a previous organoid culture method.

Melissa H LittleMurdoch Children's Research Institutemelissa.little@mcri.edu.au
Santhosh V Kumar1
Pei X Er1
Kynan T Lawlor1
Ali Motazedian1
Michelle Scurr1
Irene Ghobrial1
Alexander N Combes1
Luke Zappia1
Alicia Oshlack1
Edouard G Stanley1
Melissa H Little1
1Murdoch Children's Research Institute
Ami Day

To reference this project, please use the following link:

https://explore.data.humancellatlas.dev.clevercanary.com/projects/e0c74c7a-20a4-4505-9cf1-38dcdd23011b
None
INSDC Project Accessions:GEO Series Accessions:INSDC Study Accessions:

Atlas

None

Analysis Portals

None

Project Label

GSE117211_KidneyMicroOrganoids

Species

Homo sapiens

Sample Type

organoids

Anatomical Entity

embryo

Organ Part

Unspecified

Selected Cell Types

Unspecified

Model Organ

kidney

Disease Status (Specimen)

normal

Disease Status (Donor)

normal

Development Stage

embryonic human stage

Library Construction Method

10x 3' v2

Nucleic Acid Source

single cell

Paired End

false

Analysis Protocol

analysis_protocol

File Format

3 file formats

Cell Count Estimate

4.0k

Donor Count

2
fastq.gz2 file(s)tar1 file(s)xlsx1 file(s)